Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 WASH6P-202ENST00000359512 1437 ntBASIC20.83■□□□□ 0.93
NFKBIEO00221 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.83■□□□□ 0.92
NFKBIEO00221 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NFKBIEO00221 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NFKBIEO00221 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NFKBIEO00221 AL020996.1-203ENST00000536896 2307 ntBASIC20.83■□□□□ 0.92
NFKBIEO00221 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NFKBIEO00221 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NFKBIEO00221 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NFKBIEO00221 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.82■□□□□ 0.92
NFKBIEO00221 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.82■□□□□ 0.92
NFKBIEO00221 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.82■□□□□ 0.92
NFKBIEO00221 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.82■□□□□ 0.92
NFKBIEO00221 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.82■□□□□ 0.92
NFKBIEO00221 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.82■□□□□ 0.92
NFKBIEO00221 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.82■□□□□ 0.92
NFKBIEO00221 AC027307.2-201ENST00000591252 911 ntBASIC20.82■□□□□ 0.92
NFKBIEO00221 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.82■□□□□ 0.92
NFKBIEO00221 SPDYE12P-201ENST00000618416 771 ntBASIC20.82■□□□□ 0.92
NFKBIEO00221 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
NFKBIEO00221 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NFKBIEO00221 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.82■□□□□ 0.92
NFKBIEO00221 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NFKBIEO00221 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NFKBIEO00221 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NFKBIEO00221 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKBIEO00221 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKBIEO00221 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.81■□□□□ 0.92
NFKBIEO00221 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKBIEO00221 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NFKBIEO00221 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.81■□□□□ 0.92
NFKBIEO00221 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NFKBIEO00221 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NFKBIEO00221 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.81■□□□□ 0.92
NFKBIEO00221 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.81■□□□□ 0.92
NFKBIEO00221 GPR53P-205ENST00000457298 1084 ntBASIC20.81■□□□□ 0.92
NFKBIEO00221 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NFKBIEO00221 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.81■□□□□ 0.92
NFKBIEO00221 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NFKBIEO00221 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.81■□□□□ 0.92
NFKBIEO00221 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.81■□□□□ 0.92
NFKBIEO00221 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NFKBIEO00221 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.81■□□□□ 0.92
NFKBIEO00221 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
NFKBIEO00221 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.8■□□□□ 0.92
NFKBIEO00221 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NFKBIEO00221 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.8■□□□□ 0.92
NFKBIEO00221 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.8■□□□□ 0.92
NFKBIEO00221 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.8■□□□□ 0.92
NFKBIEO00221 AC005412.3-201ENST00000580309 715 ntBASIC20.8■□□□□ 0.92
NFKBIEO00221 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.8■□□□□ 0.92
NFKBIEO00221 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.8■□□□□ 0.92
NFKBIEO00221 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.8■□□□□ 0.92
NFKBIEO00221 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.8■□□□□ 0.92
NFKBIEO00221 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NFKBIEO00221 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NFKBIEO00221 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.8■□□□□ 0.92
NFKBIEO00221 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.8■□□□□ 0.92
NFKBIEO00221 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NFKBIEO00221 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.79■□□□□ 0.92
NFKBIEO00221 AC012569.1-201ENST00000591191 1524 ntBASIC20.79■□□□□ 0.92
NFKBIEO00221 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.79■□□□□ 0.92
NFKBIEO00221 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NFKBIEO00221 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.79■□□□□ 0.92
NFKBIEO00221 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NFKBIEO00221 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.79■□□□□ 0.92
NFKBIEO00221 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.79■□□□□ 0.92
NFKBIEO00221 TP53TG3HP-202ENST00000569755 579 ntBASIC20.79■□□□□ 0.92
NFKBIEO00221 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.79■□□□□ 0.92
NFKBIEO00221 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.79■□□□□ 0.92
NFKBIEO00221 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.79■□□□□ 0.92
NFKBIEO00221 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
NFKBIEO00221 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms