Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 MIR4259-201ENST00000584466 101 ntBASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 AC003101.2-201ENST00000612557 442 ntBASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 HAUS4P1-201ENST00000406739 1145 ntBASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 HCG4-201ENST00000418983 998 ntBASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM88BA6NKF7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 AC087499.6-201ENST00000411576 835 ntBASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 DFFBP1-201ENST00000433250 979 ntBASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM88BA6NKF7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 AC099568.2-201ENST00000609194 695 ntBASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 AC007967.4-201ENST00000614700 386 ntBASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 AL391825.1-201ENST00000457671 1364 ntBASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TMEM88BA6NKF7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 AC012569.1-201ENST00000591191 1524 ntBASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms