Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 KRT18P13-201ENST00000400056 1290 ntBASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 SLC25A1P1-201ENST00000528351 927 ntBASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 AC139887.3-201ENST00000568585 713 ntBASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBAL3A6NHL2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 AC018712.1-201ENST00000455767 687 ntBASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 ZNF259P1-201ENST00000407656 1365 ntBASIC15.71■□□□□ 0.11
TUBAL3A6NHL2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.71■□□□□ 0.1
TUBAL3A6NHL2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TUBAL3A6NHL2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
TUBAL3A6NHL2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TUBAL3A6NHL2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 FGFR3P6-201ENST00000457012 610 ntBASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 AC106730.1-201ENST00000566722 1090 ntBASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBAL3A6NHL2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms