Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 SNORA78-201ENST00000459373 127 ntBASIC18.96■□□□□ 0.63
CCDC66A2RUB6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 EGLN1P1-201ENST00000531623 762 ntBASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC66A2RUB6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 SEC1P-202ENST00000473944 940 ntBASIC18.95■□□□□ 0.62
CCDC66A2RUB6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 AC008687.5-201ENST00000593746 558 ntBASIC18.95■□□□□ 0.62
CCDC66A2RUB6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC66A2RUB6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 AC128688.1-201ENST00000487626 519 ntBASIC18.94■□□□□ 0.62
CCDC66A2RUB6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 AC132938.6-201ENST00000623828 1655 ntBASIC18.94■□□□□ 0.62
CCDC66A2RUB6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 KRT17P2-201ENST00000300992 1314 ntBASIC18.94■□□□□ 0.62
CCDC66A2RUB6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC66A2RUB6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms