Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV18A0A075B6X5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 LINC01311-201ENST00000565162 1445 ntBASIC15.04■□□□□ -0
TRAV18A0A075B6X5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 MIR935-201ENST00000401179 91 ntBASIC15.04■□□□□ -0
TRAV18A0A075B6X5 SEC1P-202ENST00000473944 940 ntBASIC15.04■□□□□ -0
TRAV18A0A075B6X5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV18A0A075B6X5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AC092338.2-201ENST00000568827 1415 ntBASIC15.03■□□□□ -0
TRAV18A0A075B6X5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 CCR12P-201ENST00000446203 998 ntBASIC15.03■□□□□ -0
TRAV18A0A075B6X5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AC024243.1-201ENST00000609234 778 ntBASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AL359736.2-201ENST00000621992 437 ntBASIC15.03■□□□□ -0
TRAV18A0A075B6X5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 LINC02012-201ENST00000608206 1725 ntBASIC15.03■□□□□ -0
TRAV18A0A075B6X5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV18A0A075B6X5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV18A0A075B6X5 BX276092.7-203ENST00000637198 1536 ntBASIC15.02■□□□□ -0
TRAV18A0A075B6X5 PCDHA1-201ENST00000378133 2726 ntBASIC15.02■□□□□ -0
TRAV18A0A075B6X5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms