Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1G3Q9Y6M4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AC009336.1-201ENST00000608941 1553 ntBASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AC004967.1-201ENST00000453589 447 ntBASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AC108073.2-201ENST00000464002 357 ntBASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AP001160.2-201ENST00000596071 487 ntBASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AL805961.1-202ENST00000641562 540 ntBASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 AC009949.1-201ENST00000623048 1830 ntBASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1G3Q9Y6M4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 GPR89P-201ENST00000407924 1495 ntBASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 AC135776.1-201ENST00000319817 2481 ntBASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 KRT18P2-201ENST00000447938 1258 ntBASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CSNK1G3Q9Y6M4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms