Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 FAAHP1-202ENST00000446499 1238 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 FDX1P1-201ENST00000449115 551 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 AP000867.3-201ENST00000524675 377 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 AC104390.1-201ENST00000555663 520 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 TPSP2-201ENST00000561760 610 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 IFNL4P1-201ENST00000607083 540 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 AC010240.3-201ENST00000607688 395 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 AL163051.1-201ENST00000569214 1512 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 MIR149-201ENST00000384879 89 ntBASIC16.48■□□□□ 0.23
RNF6Q9Y252 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 DRAXINP1-201ENST00000437611 948 ntBASIC16.48■□□□□ 0.23
RNF6Q9Y252 LINC00265-3P-201ENST00000447588 903 ntBASIC16.48■□□□□ 0.23
RNF6Q9Y252 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 AC133963.1-201ENST00000504166 1679 ntBASIC16.48■□□□□ 0.23
RNF6Q9Y252 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF6Q9Y252 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF6Q9Y252 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 KRT8P10-201ENST00000450021 1447 ntBASIC16.47■□□□□ 0.23
RNF6Q9Y252 HOXB1-202ENST00000577092 1414 ntBASIC16.47■□□□□ 0.23
RNF6Q9Y252 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 KRT17P6-201ENST00000453795 1220 ntBASIC16.47■□□□□ 0.23
RNF6Q9Y252 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms