Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AC116353.5-201ENST00000638148 1699 ntBASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 SCARNA2-201ENST00000458748 420 ntBASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 AL121912.1-201ENST00000603683 238 ntBASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA4Q9UN74 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 AC108860.2-201ENST00000562760 2183 ntBASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 AC004870.1-201ENST00000315132 882 ntBASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 SLC25A1P3-201ENST00000395415 828 ntBASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA4Q9UN74 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 FAAHP1-202ENST00000446499 1238 ntBASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 AC079781.3-201ENST00000449110 356 ntBASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 FZD10-202ENST00000539839 3282 ntBASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA4Q9UN74 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
PCDHA4Q9UN74 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms