Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 TSEN15P1-201ENST00000423257 515 ntBASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 ACTL9-202ENST00000612068 1252 ntBASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2IRD1Q9UHL9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2IRD1Q9UHL9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AL139400.1-201ENST00000366220 510 ntBASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AC004835.2-201ENST00000603762 682 ntBASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AC106028.4-201ENST00000614509 607 ntBASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 REXO1L3P-201ENST00000622202 1288 ntBASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AC105339.1-204ENST00000636249 355 ntBASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF2IRD1Q9UHL9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
GTF2IRD1Q9UHL9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GTF2IRD1Q9UHL9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GTF2IRD1Q9UHL9 AC092919.2-201ENST00000623631 1645 ntBASIC19.08■□□□□ 0.65
GTF2IRD1Q9UHL9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 AC004461.1-201ENST00000412461 403 ntBASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.08■□□□□ 0.64
GTF2IRD1Q9UHL9 AC093028.1-201ENST00000622998 982 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms