Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 AC015936.2-201ENST00000593177 259 ntBASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 RPSAP52-203ENST00000622976 1023 ntBASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 RNA5SP412-201ENST00000516234 123 ntBASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 PDIA3P1-201ENST00000471856 1510 ntBASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 AC093525.8-201ENST00000624099 1342 ntBASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 LDHBP1-201ENST00000455730 1119 ntBASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIMBP3Q9UFD9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AC016027.1-202ENST00000607927 1699 ntBASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 BTBD6P1-201ENST00000412176 1267 ntBASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AC253536.4-201ENST00000440539 267 ntBASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 CTBP2P5-201ENST00000454986 1264 ntBASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AL138918.1-201ENST00000568306 659 ntBASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIMBP3Q9UFD9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 AC079328.1-201ENST00000560358 952 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 AC016629.1-201ENST00000596579 586 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 WFDC1-204ENST00000613603 549 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 FOXO1B-201ENST00000504678 1527 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 AL035456.1-201ENST00000456064 1369 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 LINC00565-201ENST00000562710 2331 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 MYCLP2-201ENST00000449268 967 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 AC005412.3-201ENST00000580309 715 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 AL031055.1-201ENST00000606362 631 ntBASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIMBP3Q9UFD9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 AL158211.5-201ENST00000623583 2518 ntBASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 AC105233.2-201ENST00000523697 349 ntBASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 AF228730.5-201ENST00000530288 346 ntBASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 AC026740.1-201ENST00000607068 791 ntBASIC27.26■■□□□ 1.95
RIMBP3Q9UFD9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 AC018665.1-201ENST00000622927 1362 ntBASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms