Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 AC022144.1-201ENST00000602255 1580 ntBASIC18.31■□□□□ 0.52
CHD7Q9P2D1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 AL513480.1-201ENST00000451731 511 ntBASIC18.31■□□□□ 0.52
CHD7Q9P2D1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.31■□□□□ 0.52
CHD7Q9P2D1 MIR6799-201ENST00000620297 69 ntBASIC18.31■□□□□ 0.52
CHD7Q9P2D1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 REXO1L9P-201ENST00000604264 2108 ntBASIC18.31■□□□□ 0.52
CHD7Q9P2D1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD7Q9P2D1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.3■□□□□ 0.52
CHD7Q9P2D1 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.29■□□□□ 0.52
CHD7Q9P2D1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AL135999.2-201ENST00000622438 1686 ntBASIC18.29■□□□□ 0.52
CHD7Q9P2D1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 RPS2P32-201ENST00000439199 892 ntBASIC18.29■□□□□ 0.52
CHD7Q9P2D1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AC104581.1-202ENST00000635932 2618 ntBASIC18.29■□□□□ 0.52
CHD7Q9P2D1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AL138828.2-201ENST00000615812 383 ntBASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AC100757.3-201ENST00000622361 1406 ntBASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AL033527.4-201ENST00000641026 673 ntBASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHD7Q9P2D1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 AC245100.3-201ENST00000441281 285 ntBASIC18.28■□□□□ 0.52
CHD7Q9P2D1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.28■□□□□ 0.52
CHD7Q9P2D1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms