Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 AC099336.1-202ENST00000602961 463 ntBASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 FLJ13224-201ENST00000313737 1514 ntBASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 AC046158.3-201ENST00000624947 2558 ntBASIC16.78■□□□□ 0.28
NECTIN3Q9NQS3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 NUS1P1-201ENST00000446295 882 ntBASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 MINOS1P3-201ENST00000457048 203 ntBASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 FOSL1P1-201ENST00000511041 816 ntBASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 PRELID1P1-202ENST00000567272 903 ntBASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 AC022211.2-201ENST00000585075 2527 ntBASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.77■□□□□ 0.28
NECTIN3Q9NQS3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
NECTIN3Q9NQS3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 AC018695.7-201ENST00000624587 2492 ntBASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 AC138894.3-201ENST00000603787 634 ntBASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 AC125634.1-201ENST00000438758 1403 ntBASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NECTIN3Q9NQS3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms