Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 AC120114.3-201ENST00000611923 658 ntBASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 LINC01451-201ENST00000623792 534 ntBASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 IL9RP2-201ENST00000423948 1312 ntBASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VAT1LQ9HCJ6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 AC092910.1-201ENST00000482027 1129 ntBASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 AC009336.1-201ENST00000608941 1553 ntBASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 AC107918.4-202ENST00000641623 219 ntBASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.23■□□□□ 0.83
VAT1LQ9HCJ6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 MYCLP1-201ENST00000372451 1075 ntBASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 AC139887.3-201ENST00000568585 713 ntBASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
VAT1LQ9HCJ6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms