Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NELFAQ9H3P2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 NUS1P1-201ENST00000446295 882 ntBASIC15.59■□□□□ 0.09
NELFAQ9H3P2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NELFAQ9H3P2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NELFAQ9H3P2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 AC005104.2-201ENST00000427818 678 ntBASIC15.58■□□□□ 0.08
NELFAQ9H3P2 AC007967.3-201ENST00000434308 558 ntBASIC15.58■□□□□ 0.08
NELFAQ9H3P2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 MINOS1P3-201ENST00000457048 203 ntBASIC15.58■□□□□ 0.08
NELFAQ9H3P2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.58■□□□□ 0.08
NELFAQ9H3P2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 AC138894.3-201ENST00000603787 634 ntBASIC15.58■□□□□ 0.08
NELFAQ9H3P2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.58■□□□□ 0.08
NELFAQ9H3P2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
NELFAQ9H3P2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.57■□□□□ 0.08
NELFAQ9H3P2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NELFAQ9H3P2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.57■□□□□ 0.08
NELFAQ9H3P2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.57■□□□□ 0.08
NELFAQ9H3P2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NELFAQ9H3P2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms