Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 FDX1P1-201ENST00000449115 551 ntBASIC18.4■□□□□ 0.54
LHX5Q9H2C1 PRYP5-201ENST00000451909 266 ntBASIC18.4■□□□□ 0.54
LHX5Q9H2C1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 AC148477.5-201ENST00000625164 1645 ntBASIC18.4■□□□□ 0.54
LHX5Q9H2C1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 AC093525.9-201ENST00000624961 1746 ntBASIC18.4■□□□□ 0.54
LHX5Q9H2C1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LHX5Q9H2C1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.54
LHX5Q9H2C1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LHX5Q9H2C1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LHX5Q9H2C1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 AP001094.4-201ENST00000579008 2176 ntBASIC18.39■□□□□ 0.53
LHX5Q9H2C1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 AC020916.1-201ENST00000587762 1774 ntBASIC18.39■□□□□ 0.53
LHX5Q9H2C1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.39■□□□□ 0.53
LHX5Q9H2C1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 AL031008.1-201ENST00000619963 541 ntBASIC18.38■□□□□ 0.53
LHX5Q9H2C1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LHX5Q9H2C1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LHX5Q9H2C1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LHX5Q9H2C1 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.37■□□□□ 0.53
LHX5Q9H2C1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LHX5Q9H2C1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.37■□□□□ 0.53
LHX5Q9H2C1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms