Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 AC073508.3-201ENST00000619697 1419 ntBASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR2J3Q9H1A7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 HBZP1-201ENST00000354915 429 ntBASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 RNF152P1-201ENST00000397754 604 ntBASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 AC092597.1-201ENST00000487352 616 ntBASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 AL139327.4-201ENST00000612362 153 ntBASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 LYSMD4-203ENST00000378904 2122 ntBASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2J3Q9H1A7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 MYCLP1-201ENST00000372451 1075 ntBASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 TSPY5P-201ENST00000426936 936 ntBASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 AC117947.1-201ENST00000427448 529 ntBASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 AC073912.3-201ENST00000624414 853 ntBASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms