Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 TIMM8BP1-201ENST00000452384 211 ntBASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 GGTLC5P-201ENST00000617623 998 ntBASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 AL358472.5-202ENST00000641448 1267 ntBASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 AL499627.1-201ENST00000569373 2188 ntBASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2OQ9C0C9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 CROCCP3-202ENST00000420820 1947 ntBASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 AC096633.1-201ENST00000422446 749 ntBASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 CR383656.12-201ENST00000549567 513 ntBASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 OR7E47P-204ENST00000575924 449 ntBASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 AC027307.3-201ENST00000594262 1100 ntBASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2OQ9C0C9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 NOC2LP1-202ENST00000452600 2235 ntBASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 ANO7L1-203ENST00000602586 1720 ntBASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 AL138781.2-201ENST00000617896 1843 ntBASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 AC005237.2-201ENST00000434368 219 ntBASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 AC051619.7-201ENST00000568314 623 ntBASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2OQ9C0C9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms