Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 IGHV3-41-201ENST00000613121 348 ntBASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AC005332.1-201ENST00000577698 1310 ntBASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AC116353.5-201ENST00000638148 1699 ntBASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AC002558.1-201ENST00000488906 803 ntBASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AL138831.2-201ENST00000606564 490 ntBASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AP000550.4-202ENST00000639755 178 ntBASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF3BQ9BZI7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 KRT8P26-201ENST00000534154 1276 ntBASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.83■□□□□ 0.93
UPF3BQ9BZI7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
UPF3BQ9BZI7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.83■□□□□ 0.92
UPF3BQ9BZI7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UPF3BQ9BZI7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.83■□□□□ 0.92
UPF3BQ9BZI7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UPF3BQ9BZI7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 AC016396.2-201ENST00000562575 1417 ntBASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 SLC25A1P3-201ENST00000395415 828 ntBASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 AC109462.3-201ENST00000573934 613 ntBASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 AC106886.4-201ENST00000623557 2502 ntBASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF3BQ9BZI7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 AC046185.3-201ENST00000623228 1824 ntBASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms