Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP3-3Q9BYR6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC01343-201ENST00000431311 2283 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 TPD52L1-204ENST00000392482 1165 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 MIR1302-11-201ENST00000408051 138 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 MIR1302-9-201ENST00000408365 138 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 MIR548F1-201ENST00000408667 84 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 MIR1302-10-201ENST00000408734 138 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 C2orf40-202ENST00000409944 799 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC006960.1-201ENST00000419980 153 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 GAPDHP67-201ENST00000422905 788 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 TRIM60P3Y-201ENST00000432201 673 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC113430.1-201ENST00000506872 718 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC019171.1-201ENST00000601251 1056 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AP001995.2-201ENST00000602773 897 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 MIR1302-2-201ENST00000607096 138 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AP003392.5-201ENST00000607857 415 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AL731556.2-201ENST00000615610 770 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC239804.2-201ENST00000622818 522 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC002094.5-201ENST00000623773 629 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AC097374.2-201ENST00000618617 1306 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AL022322.1-201ENST00000609162 1433 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 IL6-204ENST00000404625 1527 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AL162632.3-201ENST00000566976 1625 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 AL353803.4-201ENST00000565882 1934 ntBASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-3Q9BYR6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 AF131216.4-201ENST00000638924 1588 ntBASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 CBR3-AS1-201ENST00000413862 1543 ntTSL 5 BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-3Q9BYR6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms