Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 AC006116.8-202ENST00000587620 1550 ntBASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 AC134043.2-201ENST00000624206 2238 ntBASIC5.93□□□□□ -1.46
KRTAP4-3Q9BYR4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC079328.2-201ENST00000561241 3354 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 YBX2P1-201ENST00000394192 760 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 MIR1233-2-201ENST00000408138 82 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 MIR1233-1-201ENST00000408722 82 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 IGLL3P-201ENST00000412472 434 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 LINC00982-205ENST00000420957 435 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 LAGE3P1-201ENST00000425356 484 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC005104.2-201ENST00000427818 678 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 COX10-202ENST00000429152 875 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 HTR5BP-201ENST00000430851 1154 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ALG1L5P-201ENST00000482043 771 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 STK19B-204ENST00000512515 211 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 STK25P1-201ENST00000585406 838 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC064836.3-201ENST00000607928 673 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AL691403.2-201ENST00000618460 490 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC004706.3-202ENST00000621574 984 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 NOC2LP1-202ENST00000452600 2235 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 FLJ13224-201ENST00000313737 1514 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 KRT18P55-202ENST00000578578 1546 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AC008764.6-201ENST00000595909 2069 ntBASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms