Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 AC092647.4-201ENST00000457211 535 ntBASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 RN7SL850P-201ENST00000579959 291 ntBASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 AC022898.2-201ENST00000616822 1312 ntBASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 RCN1P1-201ENST00000400413 996 ntBASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 AC112907.2-201ENST00000448639 330 ntBASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 AC004263.2-201ENST00000617183 678 ntBASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CHRDL1Q9BU40 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 AC080080.1-201ENST00000625121 2420 ntBASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 HBZP1-201ENST00000354915 429 ntBASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms