Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 MTDHP5-201ENST00000598980 586 ntBASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 AC134684.3-201ENST00000641758 218 ntBASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PAAF1Q9BRP4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 AC002310.6-201ENST00000624451 1377 ntBASIC18.55■□□□□ 0.56
PAAF1Q9BRP4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 AC007613.1-201ENST00000572811 2597 ntBASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 GGTLC5P-201ENST00000617623 998 ntBASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PAAF1Q9BRP4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 AC004967.1-201ENST00000453589 447 ntBASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 AP001160.2-201ENST00000596071 487 ntBASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 AC004877.2-201ENST00000623941 599 ntBASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PAAF1Q9BRP4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms