Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC113404.2-201ENST00000507884 177 ntBASIC16.26■□□□□ 0.19
TM9SF2Q99805 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 Z69720.1-201ENST00000601483 472 ntBASIC16.26■□□□□ 0.19
TM9SF2Q99805 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.26■□□□□ 0.19
TM9SF2Q99805 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TM9SF2Q99805 AP001094.4-201ENST00000579008 2176 ntBASIC16.26■□□□□ 0.19
TM9SF2Q99805 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF2Q99805 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 AC104819.1-201ENST00000504587 486 ntBASIC16.25■□□□□ 0.19
TM9SF2Q99805 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 AC111152.3-201ENST00000569699 673 ntBASIC16.25■□□□□ 0.19
TM9SF2Q99805 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 AL592071.1-201ENST00000611956 408 ntBASIC16.25■□□□□ 0.19
TM9SF2Q99805 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 AC124864.1-201ENST00000623408 392 ntBASIC16.25■□□□□ 0.19
TM9SF2Q99805 AC012313.10-201ENST00000623509 926 ntBASIC16.25■□□□□ 0.19
TM9SF2Q99805 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.25■□□□□ 0.19
TM9SF2Q99805 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 GMCL1P1-201ENST00000463439 1581 ntBASIC16.25■□□□□ 0.19
TM9SF2Q99805 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.25■□□□□ 0.19
TM9SF2Q99805 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF2Q99805 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AC099343.3-201ENST00000605834 2503 ntBASIC16.24■□□□□ 0.19
TM9SF2Q99805 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 LINC01711-201ENST00000598340 967 ntBASIC16.24■□□□□ 0.19
TM9SF2Q99805 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AL121772.3-201ENST00000610840 674 ntBASIC16.24■□□□□ 0.19
TM9SF2Q99805 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.24■□□□□ 0.19
TM9SF2Q99805 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TM9SF2Q99805 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms