Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC24.87■■□□□ 1.57
SCAF11Q99590 AC116407.2-201ENST00000613639 860 ntBASIC24.87■■□□□ 1.57
SCAF11Q99590 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
SCAF11Q99590 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCAF11Q99590 HLA-DQB1-201ENST00000374943 1656 ntBASIC24.87■■□□□ 1.57
SCAF11Q99590 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
SCAF11Q99590 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC24.86■■□□□ 1.57
SCAF11Q99590 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC24.86■■□□□ 1.57
SCAF11Q99590 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC24.86■■□□□ 1.57
SCAF11Q99590 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 EDF1-203ENST00000371649 790 ntTSL 2 BASIC24.86■■□□□ 1.57
SCAF11Q99590 GRAP-202ENST00000395635 834 ntTSL 2 BASIC24.86■■□□□ 1.57
SCAF11Q99590 AC107890.1-201ENST00000422478 521 ntBASIC24.86■■□□□ 1.57
SCAF11Q99590 FAM58DP-201ENST00000428076 619 ntBASIC24.86■■□□□ 1.57
SCAF11Q99590 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 AC125807.1-201ENST00000483097 614 ntBASIC24.86■■□□□ 1.57
SCAF11Q99590 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC24.86■■□□□ 1.57
SCAF11Q99590 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC24.86■■□□□ 1.57
SCAF11Q99590 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC24.86■■□□□ 1.57
SCAF11Q99590 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC24.86■■□□□ 1.57
SCAF11Q99590 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
SCAF11Q99590 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
SCAF11Q99590 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCAF11Q99590 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC24.85■■□□□ 1.57
SCAF11Q99590 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC24.85■■□□□ 1.57
SCAF11Q99590 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 AC005237.2-201ENST00000434368 219 ntBASIC24.85■■□□□ 1.57
SCAF11Q99590 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC24.85■■□□□ 1.57
SCAF11Q99590 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.85■■□□□ 1.57
SCAF11Q99590 DUX4L17-201ENST00000557360 1267 ntBASIC24.85■■□□□ 1.57
SCAF11Q99590 BSG-214ENST00000614867 960 ntTSL 3 BASIC24.85■■□□□ 1.57
SCAF11Q99590 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
SCAF11Q99590 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
SCAF11Q99590 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 HARS-201ENST00000307633 1780 ntTSL 2 BASIC24.85■■□□□ 1.57
SCAF11Q99590 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC24.85■■□□□ 1.57
SCAF11Q99590 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
SCAF11Q99590 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SCAF11Q99590 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCAF11Q99590 TUBB3P1-201ENST00000405796 1332 ntBASIC24.85■■□□□ 1.57
SCAF11Q99590 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 RAC2-204ENST00000406508 893 ntTSL 5 BASIC24.84■■□□□ 1.57
SCAF11Q99590 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC24.84■■□□□ 1.57
SCAF11Q99590 AC140658.5-201ENST00000438532 169 ntBASIC24.84■■□□□ 1.57
SCAF11Q99590 AC079140.1-201ENST00000508039 487 ntBASIC24.84■■□□□ 1.57
SCAF11Q99590 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 MNT-208ENST00000575394 606 ntTSL 4 BASIC24.84■■□□□ 1.57
SCAF11Q99590 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC24.84■■□□□ 1.57
SCAF11Q99590 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC24.84■■□□□ 1.57
SCAF11Q99590 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
SCAF11Q99590 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC24.84■■□□□ 1.57
SCAF11Q99590 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SCAF11Q99590 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.57
SCAF11Q99590 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC24.83■■□□□ 1.57
SCAF11Q99590 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
SCAF11Q99590 AP005018.1-201ENST00000525475 301 ntBASIC24.83■■□□□ 1.57
SCAF11Q99590 FAM86C2P-203ENST00000528684 1004 ntBASIC24.83■■□□□ 1.57
SCAF11Q99590 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC24.83■■□□□ 1.57
SCAF11Q99590 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC24.83■■□□□ 1.57
SCAF11Q99590 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC24.83■■□□□ 1.57
SCAF11Q99590 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC24.83■■□□□ 1.57
SCAF11Q99590 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCAF11Q99590 AC138028.4-201ENST00000564984 1845 ntBASIC24.83■■□□□ 1.56
SCAF11Q99590 RPL30-202ENST00000396070 440 ntTSL 2 BASIC24.83■■□□□ 1.56
SCAF11Q99590 CRB3P1-201ENST00000449338 276 ntBASIC24.83■■□□□ 1.56
SCAF11Q99590 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
SCAF11Q99590 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC24.83■■□□□ 1.56
SCAF11Q99590 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SCAF11Q99590 LINC02560-201ENST00000596379 459 ntBASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms