Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 AL138781.2-201ENST00000617896 1843 ntBASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 CNN2P2-201ENST00000443536 909 ntBASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 CNN2P3-201ENST00000450201 906 ntBASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 AL136317.3-201ENST00000618497 906 ntBASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 AP001059.3-201ENST00000619053 235 ntBASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRAMP1Q96RY5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 RARRES2P8-201ENST00000566335 367 ntBASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRAMP1Q96RY5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 BX323043.1-201ENST00000641006 1765 ntBASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 AC120498.9-201ENST00000339021 3867 ntBASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 GPS2P2-201ENST00000430745 888 ntBASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 AC069262.1-201ENST00000539058 672 ntBASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 AL135744.1-201ENST00000565098 629 ntBASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRAMP1Q96RY5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRAMP1Q96RY5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CRAMP1Q96RY5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRAMP1Q96RY5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.14■□□□□ 0.98
CRAMP1Q96RY5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CRAMP1Q96RY5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.14■□□□□ 0.98
CRAMP1Q96RY5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 KRT18P32-201ENST00000424695 1287 ntBASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 AC055876.3-201ENST00000431496 288 ntBASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 AC093214.1-201ENST00000511688 1107 ntBASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRAMP1Q96RY5 DUX4L17-201ENST00000557360 1267 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms