Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 BX640515.1-201ENST00000617215 977 ntBASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 AC016396.2-201ENST00000562575 1417 ntBASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 ELK2BP-201ENST00000415014 1224 ntBASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 AC079776.4-201ENST00000511039 504 ntBASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 IGHV3-22-201ENST00000520721 359 ntBASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 AP002414.3-201ENST00000589352 1468 ntBASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ECHDC3Q96DC8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 AC006504.4-201ENST00000592118 1568 ntBASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 GPR89P-201ENST00000407924 1495 ntBASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 IL9RP2-201ENST00000423948 1312 ntBASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ECHDC3Q96DC8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms