Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TTC9Q92623 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC9Q92623 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.63■□□□□ 0.25
TTC9Q92623 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TTC9Q92623 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.63■□□□□ 0.25
TTC9Q92623 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 BICD1-207ENST00000551848 1962 ntBASIC16.63■□□□□ 0.25
TTC9Q92623 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC9Q92623 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC9Q92623 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC9Q92623 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TTC9Q92623 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC9Q92623 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9Q92623 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TTC9Q92623 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC9Q92623 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TTC9Q92623 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC9Q92623 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC9Q92623 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.62■□□□□ 0.25
TTC9Q92623 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.62■□□□□ 0.25
TTC9Q92623 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC9Q92623 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC9Q92623 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.62■□□□□ 0.25
TTC9Q92623 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TTC9Q92623 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC9Q92623 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC9Q92623 AC002310.6-201ENST00000624451 1377 ntBASIC16.62■□□□□ 0.25
TTC9Q92623 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC9Q92623 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9Q92623 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.61■□□□□ 0.25
TTC9Q92623 AC135776.1-201ENST00000319817 2481 ntBASIC16.61■□□□□ 0.25
TTC9Q92623 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC9Q92623 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TTC9Q92623 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.61■□□□□ 0.25
TTC9Q92623 KRT18P27-201ENST00000427733 1299 ntBASIC16.61■□□□□ 0.25
TTC9Q92623 KRT18P65-201ENST00000439811 1286 ntBASIC16.61■□□□□ 0.25
TTC9Q92623 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 AC009154.2-201ENST00000621177 724 ntBASIC16.61■□□□□ 0.25
TTC9Q92623 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC9Q92623 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 LINC00602-201ENST00000629776 2065 ntBASIC16.61■□□□□ 0.25
TTC9Q92623 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TTC9Q92623 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TTC9Q92623 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9Q92623 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms