Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.75■■□□□ 1.23
RTF1Q92541 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.75■■□□□ 1.23
RTF1Q92541 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.75■■□□□ 1.23
RTF1Q92541 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.75■■□□□ 1.23
RTF1Q92541 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTF1Q92541 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
RTF1Q92541 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
RTF1Q92541 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.74■■□□□ 1.23
RTF1Q92541 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.74■■□□□ 1.23
RTF1Q92541 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.74■■□□□ 1.23
RTF1Q92541 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
RTF1Q92541 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.74■■□□□ 1.23
RTF1Q92541 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.74■■□□□ 1.23
RTF1Q92541 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.74■■□□□ 1.23
RTF1Q92541 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.74■■□□□ 1.23
RTF1Q92541 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.74■■□□□ 1.23
RTF1Q92541 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.74■■□□□ 1.23
RTF1Q92541 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.74■■□□□ 1.23
RTF1Q92541 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.74■■□□□ 1.23
RTF1Q92541 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTF1Q92541 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.73■■□□□ 1.23
RTF1Q92541 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
RTF1Q92541 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.73■■□□□ 1.23
RTF1Q92541 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.73■■□□□ 1.23
RTF1Q92541 ACTG1P4-201ENST00000425123 1122 ntBASIC22.73■■□□□ 1.23
RTF1Q92541 RNA5SP416-201ENST00000516838 111 ntBASIC22.73■■□□□ 1.23
RTF1Q92541 PGAM5P1-201ENST00000518923 814 ntBASIC22.73■■□□□ 1.23
RTF1Q92541 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.73■■□□□ 1.23
RTF1Q92541 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RTF1Q92541 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.73■■□□□ 1.23
RTF1Q92541 AC008667.4-201ENST00000607370 168 ntBASIC22.73■■□□□ 1.23
RTF1Q92541 AL135999.2-201ENST00000622438 1686 ntBASIC22.73■■□□□ 1.23
RTF1Q92541 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
RTF1Q92541 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.73■■□□□ 1.23
RTF1Q92541 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.73■■□□□ 1.23
RTF1Q92541 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTF1Q92541 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.72■■□□□ 1.23
RTF1Q92541 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
RTF1Q92541 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RTF1Q92541 KRT18P13-201ENST00000400056 1290 ntBASIC22.72■■□□□ 1.23
RTF1Q92541 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 IGHV3-65-201ENST00000523210 341 ntBASIC22.72■■□□□ 1.23
RTF1Q92541 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.72■■□□□ 1.23
RTF1Q92541 AC092865.5-201ENST00000545435 363 ntBASIC22.72■■□□□ 1.23
RTF1Q92541 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.72■■□□□ 1.23
RTF1Q92541 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.72■■□□□ 1.23
RTF1Q92541 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
RTF1Q92541 AL805961.1-202ENST00000641562 540 ntBASIC22.72■■□□□ 1.23
RTF1Q92541 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.72■■□□□ 1.23
RTF1Q92541 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RTF1Q92541 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.72■■□□□ 1.23
RTF1Q92541 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
RTF1Q92541 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTF1Q92541 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTF1Q92541 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTF1Q92541 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms