Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 RN7SL618P-201ENST00000477850 296 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 KRT18P65-201ENST00000439811 1286 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC109635.5-201ENST00000533593 962 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC084262.1-201ENST00000567818 751 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AL844908.2-201ENST00000609461 460 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 MIR8072-201ENST00000614241 80 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC004522.1-201ENST00000419978 654 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC018635.2-201ENST00000608625 364 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 SPTLC1P5-201ENST00000450718 252 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AL513480.1-201ENST00000451731 511 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 RN7SL8P-201ENST00000461771 266 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CU634019.7-201ENST00000624153 1185 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 FP236241.2-201ENST00000624906 1185 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 KATNBL1P6-202ENST00000562413 1466 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 FAM21FP-201ENST00000426241 1131 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 RN7SL11P-201ENST00000471305 293 ntBASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 KC6-205ENST00000599934 556 ntTSL 4 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 AP3S2-216ENST00000617003 1561 ntBASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 UROS-201ENST00000368774 744 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 AL139008.1-201ENST00000437894 228 ntBASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE2Q8WXH0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms