Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 AC114341.1-201ENST00000618070 349 ntBASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 PCDHA12-202ENST00000613593 2588 ntBASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH19Q8TAB3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH19Q8TAB3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDH19Q8TAB3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 POM121L3P-201ENST00000419331 1163 ntBASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 AC026396.1-201ENST00000419388 421 ntBASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 AC099336.1-202ENST00000602961 463 ntBASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH19Q8TAB3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms