Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COMMD1Q8N668 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
COMMD1Q8N668 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.57□□□□□ -0.08
COMMD1Q8N668 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COMMD1Q8N668 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COMMD1Q8N668 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COMMD1Q8N668 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 PCDHA14-201ENST00000506751 2298 ntBASIC14.56□□□□□ -0.08
COMMD1Q8N668 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 KRT18P23-201ENST00000435622 1283 ntBASIC14.56□□□□□ -0.08
COMMD1Q8N668 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 AC068587.9-201ENST00000641814 219 ntBASIC14.56□□□□□ -0.08
COMMD1Q8N668 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 KRT18P55-202ENST00000578578 1546 ntBASIC14.56□□□□□ -0.08
COMMD1Q8N668 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
COMMD1Q8N668 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COMMD1Q8N668 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 AL031133.1-201ENST00000406807 723 ntBASIC14.55□□□□□ -0.08
COMMD1Q8N668 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 RASA4DP-201ENST00000460726 1199 ntBASIC14.55□□□□□ -0.08
COMMD1Q8N668 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.55□□□□□ -0.08
COMMD1Q8N668 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 AC024243.1-201ENST00000609234 778 ntBASIC14.55□□□□□ -0.08
COMMD1Q8N668 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD1Q8N668 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.55□□□□□ -0.08
COMMD1Q8N668 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD1Q8N668 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms