Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 AC007613.1-201ENST00000572811 2597 ntBASIC18.82■□□□□ 0.6
HERC6Q8IVU3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 AC069262.1-201ENST00000539058 672 ntBASIC18.82■□□□□ 0.6
HERC6Q8IVU3 AC190387.1-201ENST00000551683 408 ntBASIC18.82■□□□□ 0.6
HERC6Q8IVU3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
HERC6Q8IVU3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 PI4KAP1-204ENST00000612579 1703 ntBASIC18.81■□□□□ 0.6
HERC6Q8IVU3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 AC093520.2-201ENST00000561830 333 ntBASIC18.81■□□□□ 0.6
HERC6Q8IVU3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.81■□□□□ 0.6
HERC6Q8IVU3 AC009336.1-201ENST00000608941 1553 ntBASIC18.81■□□□□ 0.6
HERC6Q8IVU3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 AC126763.1-201ENST00000552015 2118 ntBASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 AL138781.2-201ENST00000617896 1843 ntBASIC18.8■□□□□ 0.6
HERC6Q8IVU3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 RNA5SP421-201ENST00000516864 134 ntBASIC18.8■□□□□ 0.6
HERC6Q8IVU3 IGHV3-52-201ENST00000519770 353 ntBASIC18.8■□□□□ 0.6
HERC6Q8IVU3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms