Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 AC007967.3-201ENST00000434308 558 ntBASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 RN7SL606P-201ENST00000472779 293 ntBASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 AL136038.3-201ENST00000561909 1096 ntBASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 AL049597.2-201ENST00000565575 961 ntBASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 AL139327.4-201ENST00000612362 153 ntBASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00346Q8IVM7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 AL031133.1-201ENST00000406807 723 ntBASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 NTF6B-201ENST00000591913 560 ntBASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC00346Q8IVM7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 AC097374.2-201ENST00000618617 1306 ntBASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 COX5BP2-201ENST00000392354 334 ntBASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 AL845331.1-201ENST00000424978 1190 ntBASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 KRT8P26-201ENST00000534154 1276 ntBASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 AC011840.4-201ENST00000578471 627 ntBASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 AC005336.2-201ENST00000593183 939 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms