Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 SAPCD2P3-201ENST00000455031 850 ntBASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 AC046185.3-201ENST00000623228 1824 ntBASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 AC132938.5-201ENST00000624980 1813 ntBASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 PP12613-201ENST00000424958 2230 ntBASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
FAM90A1Q86YD7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 RBM17P3-201ENST00000417687 1192 ntBASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 STK19B-204ENST00000512515 211 ntBASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 FZD10-202ENST00000539839 3282 ntBASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC009336.1-201ENST00000608941 1553 ntBASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AC020916.1-201ENST00000587762 1774 ntBASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 AL645608.8-201ENST00000606034 2086 ntBASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FAM90A1Q86YD7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.66□□□□□ -0.06
FAM90A1Q86YD7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms