Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
VPS13BQ7Z7G8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 BASP1P1-201ENST00000430708 665 ntBASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 U91328.1-201ENST00000437528 223 ntBASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 AC022494.1-201ENST00000466044 728 ntBASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 TK1-204ENST00000590430 683 ntTSL 3 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VPS13BQ7Z7G8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 GNAS-203ENST00000306120 1878 ntBASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 HLA-DQB1-201ENST00000374943 1656 ntBASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 MIR1909-201ENST00000411312 80 ntBASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 KLF2P3-201ENST00000451977 1087 ntBASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 HILS1-202ENST00000545329 423 ntBASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms