Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI1Q7Z5J4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI1Q7Z5J4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI1Q7Z5J4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI1Q7Z5J4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI1Q7Z5J4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI1Q7Z5J4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RAI1Q7Z5J4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 KRT18P55-202ENST00000578578 1546 ntBASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 AC087163.2-201ENST00000457299 853 ntBASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI1Q7Z5J4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 AC067852.2-201ENST00000590513 2313 ntBASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 AC097637.2-201ENST00000624096 1997 ntBASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 AC092902.6-201ENST00000641783 218 ntBASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI1Q7Z5J4 AL355312.1-201ENST00000407115 2176 ntBASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms