Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD4Q5XG99 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AC087163.2-201ENST00000457299 853 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 RN7SL589P-201ENST00000481268 310 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 SLC25A6P2-201ENST00000497974 877 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AC190387.1-201ENST00000551683 408 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 DUX4L27-201ENST00000554796 1261 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AC099522.2-201ENST00000607001 744 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AL645728.2-201ENST00000641974 660 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 AL135999.2-201ENST00000622438 1686 ntBASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD4Q5XG99 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 AC140658.5-201ENST00000438532 169 ntBASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 AL592309.1-201ENST00000443127 649 ntBASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 INGX-202ENST00000489074 768 ntBASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 KRT8P48-201ENST00000515599 1220 ntBASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 AL390955.2-201ENST00000603032 514 ntBASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD4Q5XG99 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.02■□□□□ 0.31
LYSMD4Q5XG99 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.02■□□□□ 0.31
LYSMD4Q5XG99 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LYSMD4Q5XG99 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD4Q5XG99 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD4Q5XG99 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.02■□□□□ 0.31
LYSMD4Q5XG99 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.02■□□□□ 0.31
LYSMD4Q5XG99 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms