Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 AL096828.2-201ENST00000567259 1965 ntBASIC16.88■□□□□ 0.29
RNF220Q5VTB9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 NAPSB-206ENST00000562112 1266 ntBASIC16.88■□□□□ 0.29
RNF220Q5VTB9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RNF220Q5VTB9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 CYP2D8P-201ENST00000433633 1490 ntBASIC16.87■□□□□ 0.29
RNF220Q5VTB9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 AL355312.1-201ENST00000407115 2176 ntBASIC16.87■□□□□ 0.29
RNF220Q5VTB9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 PHGDH-209ENST00000641074 1780 ntBASIC16.87■□□□□ 0.29
RNF220Q5VTB9 KRT8P9-201ENST00000558927 1449 ntBASIC16.87■□□□□ 0.29
RNF220Q5VTB9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF220Q5VTB9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 MMP23A-201ENST00000234610 1017 ntBASIC16.86■□□□□ 0.29
RNF220Q5VTB9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.86■□□□□ 0.29
RNF220Q5VTB9 TSPY15P-201ENST00000457163 923 ntBASIC16.86■□□□□ 0.29
RNF220Q5VTB9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 AL512604.3-201ENST00000569583 964 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms