Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM78BQ5VT40 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 MIR3180-4-201ENST00000582223 153 ntBASIC13.92□□□□□ -0.18
FAM78BQ5VT40 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 LINC01451-201ENST00000623792 534 ntBASIC13.92□□□□□ -0.18
FAM78BQ5VT40 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FAM78BQ5VT40 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 UNC93B2-201ENST00000285383 730 ntBASIC13.91□□□□□ -0.18
FAM78BQ5VT40 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FAM78BQ5VT40 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms