Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HLA-BQ31612 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-BQ31612 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 AL355306.1-201ENST00000415580 579 ntBASIC16.84■□□□□ 0.29
HLA-BQ31612 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 AC005237.2-201ENST00000434368 219 ntBASIC16.84■□□□□ 0.29
HLA-BQ31612 SPDYE11-202ENST00000450699 704 ntBASIC16.84■□□□□ 0.29
HLA-BQ31612 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.84■□□□□ 0.29
HLA-BQ31612 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-BQ31612 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 SPDYE9P-201ENST00000570642 692 ntBASIC16.84■□□□□ 0.29
HLA-BQ31612 SPDYE10P-202ENST00000612005 668 ntBASIC16.84■□□□□ 0.29
HLA-BQ31612 SPDYE8P-202ENST00000612377 668 ntBASIC16.84■□□□□ 0.29
HLA-BQ31612 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-BQ31612 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-BQ31612 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-BQ31612 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-BQ31612 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-BQ31612 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-BQ31612 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-BQ31612 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-BQ31612 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HLA-BQ31612 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
HLA-BQ31612 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-BQ31612 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-BQ31612 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 AC087163.2-201ENST00000457299 853 ntBASIC16.83■□□□□ 0.28
HLA-BQ31612 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-BQ31612 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 AC067863.1-201ENST00000494933 530 ntBASIC16.83■□□□□ 0.28
HLA-BQ31612 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-BQ31612 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-BQ31612 KRT8P48-201ENST00000515599 1220 ntBASIC16.83■□□□□ 0.28
HLA-BQ31612 RNA5SP421-201ENST00000516864 134 ntBASIC16.83■□□□□ 0.28
HLA-BQ31612 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-BQ31612 DUX4L27-201ENST00000554796 1261 ntBASIC16.83■□□□□ 0.28
HLA-BQ31612 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-BQ31612 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-BQ31612 Z92544.3-201ENST00000624747 417 ntBASIC16.83■□□□□ 0.28
HLA-BQ31612 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-BQ31612 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HLA-BQ31612 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-BQ31612 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-BQ31612 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-BQ31612 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 KRT18P55-202ENST00000578578 1546 ntBASIC16.82■□□□□ 0.28
HLA-BQ31612 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-BQ31612 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-BQ31612 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-BQ31612 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-BQ31612 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 AC069262.1-201ENST00000539058 672 ntBASIC16.82■□□□□ 0.28
HLA-BQ31612 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-BQ31612 AC015911.4-201ENST00000588022 1070 ntBASIC16.82■□□□□ 0.28
HLA-BQ31612 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-BQ31612 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-BQ31612 AC099522.2-201ENST00000607001 744 ntBASIC16.82■□□□□ 0.28
HLA-BQ31612 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-BQ31612 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms