Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CENPFP49454 COX5BP2-201ENST00000392354 334 ntBASIC19.52■□□□□ 0.72
CENPFP49454 AC084121.4-201ENST00000641598 221 ntBASIC19.52■□□□□ 0.72
CENPFP49454 AF228730.8-201ENST00000642140 221 ntBASIC19.52■□□□□ 0.72
CENPFP49454 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CENPFP49454 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CENPFP49454 AC022144.1-201ENST00000602255 1580 ntBASIC19.52■□□□□ 0.71
CENPFP49454 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CENPFP49454 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CENPFP49454 REXO1L11P-201ENST00000620964 1927 ntBASIC19.52■□□□□ 0.71
CENPFP49454 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.51■□□□□ 0.71
CENPFP49454 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CENPFP49454 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CENPFP49454 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.51■□□□□ 0.71
CENPFP49454 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.51■□□□□ 0.71
CENPFP49454 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CENPFP49454 FZD10-202ENST00000539839 3282 ntBASIC19.51■□□□□ 0.71
CENPFP49454 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CENPFP49454 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.51■□□□□ 0.71
CENPFP49454 AC002056.1-201ENST00000395613 760 ntBASIC19.51■□□□□ 0.71
CENPFP49454 GPR53P-205ENST00000457298 1084 ntBASIC19.51■□□□□ 0.71
CENPFP49454 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CENPFP49454 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.51■□□□□ 0.71
CENPFP49454 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.51■□□□□ 0.71
CENPFP49454 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.51■□□□□ 0.71
CENPFP49454 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CENPFP49454 ACA64.2-201ENST00000459014 129 ntBASIC19.51■□□□□ 0.71
CENPFP49454 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 LINC01225-203ENST00000563550 1244 ntBASIC19.51■□□□□ 0.71
CENPFP49454 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPFP49454 AC026120.1-201ENST00000611536 926 ntBASIC19.51■□□□□ 0.71
CENPFP49454 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.5■□□□□ 0.71
CENPFP49454 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.5■□□□□ 0.71
CENPFP49454 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.5■□□□□ 0.71
CENPFP49454 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.5■□□□□ 0.71
CENPFP49454 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.5■□□□□ 0.71
CENPFP49454 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.5■□□□□ 0.71
CENPFP49454 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CENPFP49454 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.5■□□□□ 0.71
CENPFP49454 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CENPFP49454 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.49■□□□□ 0.71
CENPFP49454 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 REXO1L9P-201ENST00000604264 2108 ntBASIC19.49■□□□□ 0.71
CENPFP49454 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.49■□□□□ 0.71
CENPFP49454 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.49■□□□□ 0.71
CENPFP49454 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CENPFP49454 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.49■□□□□ 0.71
CENPFP49454 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.49■□□□□ 0.71
CENPFP49454 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.49■□□□□ 0.71
CENPFP49454 STK25P1-201ENST00000585406 838 ntBASIC19.49■□□□□ 0.71
CENPFP49454 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CENPFP49454 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.49■□□□□ 0.71
CENPFP49454 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPFP49454 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPFP49454 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.48■□□□□ 0.71
CENPFP49454 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CENPFP49454 AC009336.1-201ENST00000608941 1553 ntBASIC19.48■□□□□ 0.71
CENPFP49454 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CENPFP49454 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.48■□□□□ 0.71
CENPFP49454 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.48■□□□□ 0.71
CENPFP49454 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.48■□□□□ 0.71
CENPFP49454 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms