Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL035633.1-201ENST00000406139 838 ntBASIC23.36■■□□□ 1.33
USP6P35125 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.36■■□□□ 1.33
USP6P35125 AL135744.1-201ENST00000565098 629 ntBASIC23.36■■□□□ 1.33
USP6P35125 AC092364.2-202ENST00000597012 1073 ntBASIC23.36■■□□□ 1.33
USP6P35125 AL390955.2-201ENST00000603032 514 ntBASIC23.36■■□□□ 1.33
USP6P35125 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP6P35125 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP6P35125 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP6P35125 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
USP6P35125 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC23.36■■□□□ 1.33
USP6P35125 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
USP6P35125 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP6P35125 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP6P35125 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.36■■□□□ 1.33
USP6P35125 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
USP6P35125 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
USP6P35125 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP6P35125 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP6P35125 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.35■■□□□ 1.33
USP6P35125 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC23.35■■□□□ 1.33
USP6P35125 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.35■■□□□ 1.33
USP6P35125 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.35■■□□□ 1.33
USP6P35125 RN7SL589P-201ENST00000481268 310 ntBASIC23.35■■□□□ 1.33
USP6P35125 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC23.35■■□□□ 1.33
USP6P35125 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC23.35■■□□□ 1.33
USP6P35125 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.35■■□□□ 1.33
USP6P35125 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.35■■□□□ 1.33
USP6P35125 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
USP6P35125 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.35■■□□□ 1.33
USP6P35125 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.35■■□□□ 1.33
USP6P35125 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP6P35125 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP6P35125 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC23.35■■□□□ 1.33
USP6P35125 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC23.34■■□□□ 1.33
USP6P35125 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC23.34■■□□□ 1.33
USP6P35125 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 AC079140.1-201ENST00000508039 487 ntBASIC23.34■■□□□ 1.33
USP6P35125 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23.34■■□□□ 1.33
USP6P35125 AC025678.2-201ENST00000562061 970 ntBASIC23.34■■□□□ 1.33
USP6P35125 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.34■■□□□ 1.33
USP6P35125 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC23.34■■□□□ 1.33
USP6P35125 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC23.34■■□□□ 1.33
USP6P35125 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.34■■□□□ 1.33
USP6P35125 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC23.34■■□□□ 1.33
USP6P35125 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.34■■□□□ 1.33
USP6P35125 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6P35125 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 GPS2P2-201ENST00000430745 888 ntBASIC23.33■■□□□ 1.33
USP6P35125 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC23.33■■□□□ 1.33
USP6P35125 SPDYE11-202ENST00000450699 704 ntBASIC23.33■■□□□ 1.33
USP6P35125 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC23.33■■□□□ 1.33
USP6P35125 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.33■■□□□ 1.33
USP6P35125 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
USP6P35125 SPDYE9P-201ENST00000570642 692 ntBASIC23.33■■□□□ 1.33
USP6P35125 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 SPDYE10P-202ENST00000612005 668 ntBASIC23.33■■□□□ 1.33
USP6P35125 SPDYE8P-202ENST00000612377 668 ntBASIC23.33■■□□□ 1.33
USP6P35125 Z92544.3-201ENST00000624747 417 ntBASIC23.33■■□□□ 1.33
USP6P35125 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
USP6P35125 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.33■■□□□ 1.33
USP6P35125 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.33■■□□□ 1.33
USP6P35125 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6P35125 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.32
USP6P35125 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC23.33■■□□□ 1.32
USP6P35125 FAM86GP-201ENST00000448322 971 ntBASIC23.33■■□□□ 1.32
USP6P35125 AC069335.1-201ENST00000489972 472 ntBASIC23.33■■□□□ 1.32
USP6P35125 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.33■■□□□ 1.32
USP6P35125 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP6P35125 FAM86C2P-203ENST00000528684 1004 ntBASIC23.33■■□□□ 1.32
USP6P35125 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
USP6P35125 AC243562.1-201ENST00000560672 389 ntBASIC23.33■■□□□ 1.32
USP6P35125 RARRES2P8-201ENST00000566335 367 ntBASIC23.33■■□□□ 1.32
USP6P35125 MIR4515-201ENST00000584082 81 ntBASIC23.33■■□□□ 1.32
USP6P35125 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC23.32■■□□□ 1.32
USP6P35125 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.32■■□□□ 1.32
USP6P35125 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
USP6P35125 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.32■■□□□ 1.32
USP6P35125 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC23.32■■□□□ 1.32
USP6P35125 LHX6-205ENST00000464484 666 ntTSL 2 BASIC23.32■■□□□ 1.32
USP6P35125 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC23.32■■□□□ 1.32
USP6P35125 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC23.32■■□□□ 1.32
USP6P35125 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms