Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CHMP24386 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CHMP24386 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP24386 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 RN7SL606P-201ENST00000472779 293 ntBASIC16.36■□□□□ 0.21
CHMP24386 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.36■□□□□ 0.21
CHMP24386 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 AC092119.3-201ENST00000612618 583 ntBASIC16.36■□□□□ 0.21
CHMP24386 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP24386 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP24386 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHMP24386 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP24386 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP24386 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CHMP24386 AC046158.3-201ENST00000624947 2558 ntBASIC16.35■□□□□ 0.21
CHMP24386 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHMP24386 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP24386 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 TSPY12P-201ENST00000421279 868 ntBASIC16.35■□□□□ 0.21
CHMP24386 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP24386 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHMP24386 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP24386 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP24386 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHMP24386 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP24386 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP24386 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP24386 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP24386 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 HLA-J-201ENST00000462773 1622 ntBASIC16.34■□□□□ 0.21
CHMP24386 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP24386 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP24386 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP24386 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP24386 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP24386 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP24386 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP24386 TPSP2-201ENST00000561760 610 ntBASIC16.34■□□□□ 0.21
CHMP24386 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP24386 AL592071.1-201ENST00000611956 408 ntBASIC16.34■□□□□ 0.21
CHMP24386 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP24386 AC124864.1-201ENST00000623408 392 ntBASIC16.34■□□□□ 0.21
CHMP24386 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP24386 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHMP24386 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CHMP24386 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP24386 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms