Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ABALON-201ENST00000629058 1903 ntBASIC20.21■□□□□ 0.83
ERCC3P19447 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC3P19447 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ERCC3P19447 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 AL096828.2-201ENST00000567259 1965 ntBASIC20.21■□□□□ 0.83
ERCC3P19447 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC3P19447 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.2■□□□□ 0.82
ERCC3P19447 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.2■□□□□ 0.82
ERCC3P19447 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 AC067852.2-201ENST00000590513 2313 ntBASIC20.2■□□□□ 0.82
ERCC3P19447 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
ERCC3P19447 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ERCC3P19447 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC3P19447 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ERCC3P19447 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.2■□□□□ 0.82
ERCC3P19447 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC3P19447 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC3P19447 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ERCC3P19447 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.2■□□□□ 0.82
ERCC3P19447 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ERCC3P19447 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ERCC3P19447 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC3P19447 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.19■□□□□ 0.82
ERCC3P19447 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC3P19447 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC3P19447 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.19■□□□□ 0.82
ERCC3P19447 PMS2P2-201ENST00000425039 1128 ntBASIC20.19■□□□□ 0.82
ERCC3P19447 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.19■□□□□ 0.82
ERCC3P19447 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.19■□□□□ 0.82
ERCC3P19447 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.19■□□□□ 0.82
ERCC3P19447 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.19■□□□□ 0.82
ERCC3P19447 AC090340.1-201ENST00000620778 4980 ntBASIC20.19■□□□□ 0.82
ERCC3P19447 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ERCC3P19447 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 NOC2LP1-202ENST00000452600 2235 ntBASIC20.19■□□□□ 0.82
ERCC3P19447 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC3P19447 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ERCC3P19447 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 REXO1L9P-201ENST00000604264 2108 ntBASIC20.18■□□□□ 0.82
ERCC3P19447 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ERCC3P19447 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ERCC3P19447 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.18■□□□□ 0.82
ERCC3P19447 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ERCC3P19447 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.18■□□□□ 0.82
ERCC3P19447 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ERCC3P19447 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.18■□□□□ 0.82
ERCC3P19447 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.18■□□□□ 0.82
ERCC3P19447 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC3P19447 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC3P19447 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.17■□□□□ 0.82
ERCC3P19447 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ERCC3P19447 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC3P19447 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC3P19447 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC3P19447 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ERCC3P19447 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.17■□□□□ 0.82
ERCC3P19447 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms