Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
TOP1P11387 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.53■□□□□ 0.88
TOP1P11387 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TOP1P11387 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TOP1P11387 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TOP1P11387 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TOP1P11387 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.53■□□□□ 0.88
TOP1P11387 KLF4P1-201ENST00000412782 1185 ntBASIC20.53■□□□□ 0.88
TOP1P11387 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.53■□□□□ 0.88
TOP1P11387 AL020989.1-201ENST00000422979 469 ntBASIC20.53■□□□□ 0.88
TOP1P11387 AC079776.4-201ENST00000511039 504 ntBASIC20.53■□□□□ 0.88
TOP1P11387 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.53■□□□□ 0.88
TOP1P11387 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.53■□□□□ 0.88
TOP1P11387 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.53■□□□□ 0.88
TOP1P11387 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.53■□□□□ 0.88
TOP1P11387 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TOP1P11387 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.53■□□□□ 0.88
TOP1P11387 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.53■□□□□ 0.88
TOP1P11387 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.53■□□□□ 0.88
TOP1P11387 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TOP1P11387 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TOP1P11387 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TOP1P11387 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TOP1P11387 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
TOP1P11387 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TOP1P11387 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TOP1P11387 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TOP1P11387 OR6D1P-202ENST00000641007 5290 ntBASIC20.52■□□□□ 0.88
TOP1P11387 AC134043.2-201ENST00000624206 2238 ntBASIC20.52■□□□□ 0.88
TOP1P11387 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.52■□□□□ 0.88
TOP1P11387 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TOP1P11387 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.52■□□□□ 0.88
TOP1P11387 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.52■□□□□ 0.88
TOP1P11387 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TOP1P11387 RPS2P1-201ENST00000434010 821 ntBASIC20.52■□□□□ 0.88
TOP1P11387 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.52■□□□□ 0.88
TOP1P11387 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
TOP1P11387 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TOP1P11387 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.52■□□□□ 0.88
TOP1P11387 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.52■□□□□ 0.88
TOP1P11387 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TOP1P11387 FAM215A-202ENST00000632077 792 ntBASIC20.52■□□□□ 0.88
TOP1P11387 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TOP1P11387 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TOP1P11387 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
TOP1P11387 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.52■□□□□ 0.87
TOP1P11387 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TOP1P11387 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TOP1P11387 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 AC004817.3-201ENST00000602957 2129 ntBASIC20.51■□□□□ 0.87
TOP1P11387 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TOP1P11387 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 MYCLP1-201ENST00000372451 1075 ntBASIC20.51■□□□□ 0.87
TOP1P11387 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.51■□□□□ 0.87
TOP1P11387 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TOP1P11387 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TOP1P11387 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.51■□□□□ 0.87
TOP1P11387 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
TOP1P11387 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TOP1P11387 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.5■□□□□ 0.87
TOP1P11387 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.5■□□□□ 0.87
TOP1P11387 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 GNAS-203ENST00000306120 1878 ntBASIC20.5■□□□□ 0.87
TOP1P11387 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms