Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.49■□□□□ 0.71
RARBP10826 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.49■□□□□ 0.71
RARBP10826 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.49■□□□□ 0.71
RARBP10826 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.49■□□□□ 0.71
RARBP10826 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.49■□□□□ 0.71
RARBP10826 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.49■□□□□ 0.71
RARBP10826 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.49■□□□□ 0.71
RARBP10826 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RARBP10826 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.49■□□□□ 0.71
RARBP10826 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.49■□□□□ 0.71
RARBP10826 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARBP10826 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.48■□□□□ 0.71
RARBP10826 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 HLA-J-203ENST00000494367 1087 ntBASIC19.48■□□□□ 0.71
RARBP10826 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.48■□□□□ 0.71
RARBP10826 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.48■□□□□ 0.71
RARBP10826 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RARBP10826 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.48■□□□□ 0.71
RARBP10826 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARBP10826 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.47■□□□□ 0.71
RARBP10826 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RARBP10826 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.47■□□□□ 0.71
RARBP10826 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RARBP10826 ACTG1P4-201ENST00000425123 1122 ntBASIC19.47■□□□□ 0.71
RARBP10826 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.47■□□□□ 0.71
RARBP10826 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.47■□□□□ 0.71
RARBP10826 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.47■□□□□ 0.71
RARBP10826 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.47■□□□□ 0.71
RARBP10826 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.47■□□□□ 0.71
RARBP10826 AC022145.2-201ENST00000598203 171 ntBASIC19.47■□□□□ 0.71
RARBP10826 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RARBP10826 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.47■□□□□ 0.71
RARBP10826 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.47■□□□□ 0.71
RARBP10826 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RARBP10826 AL121761.2-201ENST00000598007 1648 ntBASIC19.47■□□□□ 0.71
RARBP10826 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.47■□□□□ 0.71
RARBP10826 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARBP10826 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RARBP10826 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RARBP10826 AL138781.2-201ENST00000617896 1843 ntBASIC19.46■□□□□ 0.71
RARBP10826 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 AC023141.5-201ENST00000458585 616 ntBASIC19.46■□□□□ 0.71
RARBP10826 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.46■□□□□ 0.71
RARBP10826 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.46■□□□□ 0.71
RARBP10826 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.46■□□□□ 0.71
RARBP10826 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.46■□□□□ 0.71
RARBP10826 AL590787.1-201ENST00000568856 1315 ntBASIC19.46■□□□□ 0.71
RARBP10826 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RARBP10826 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.46■□□□□ 0.71
RARBP10826 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RARBP10826 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARBP10826 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.45■□□□□ 0.7
RARBP10826 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RARBP10826 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RARBP10826 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms