Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.86■□□□□ 0.13
FREM3P0C091 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 FAM220CP-201ENST00000395253 831 ntBASIC15.86■□□□□ 0.13
FREM3P0C091 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.86■□□□□ 0.13
FREM3P0C091 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.86■□□□□ 0.13
FREM3P0C091 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.86■□□□□ 0.13
FREM3P0C091 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 AC116407.2-201ENST00000613639 860 ntBASIC15.86■□□□□ 0.13
FREM3P0C091 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.86■□□□□ 0.13
FREM3P0C091 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
FREM3P0C091 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
FREM3P0C091 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FREM3P0C091 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FREM3P0C091 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.85■□□□□ 0.13
FREM3P0C091 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.85■□□□□ 0.13
FREM3P0C091 PGAM5P1-201ENST00000518923 814 ntBASIC15.85■□□□□ 0.13
FREM3P0C091 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.85■□□□□ 0.13
FREM3P0C091 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
FREM3P0C091 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.85■□□□□ 0.13
FREM3P0C091 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.85■□□□□ 0.13
FREM3P0C091 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.85■□□□□ 0.13
FREM3P0C091 AL049840.3-201ENST00000602669 611 ntBASIC15.85■□□□□ 0.13
FREM3P0C091 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
FREM3P0C091 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FREM3P0C091 AL049757.1-201ENST00000616842 1596 ntBASIC15.84■□□□□ 0.13
FREM3P0C091 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
FREM3P0C091 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.84■□□□□ 0.13
FREM3P0C091 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.84■□□□□ 0.13
FREM3P0C091 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 AC132938.5-201ENST00000624980 1813 ntBASIC15.84■□□□□ 0.13
FREM3P0C091 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
FREM3P0C091 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 AL590627.1-203ENST00000421194 1026 ntBASIC15.84■□□□□ 0.13
FREM3P0C091 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.84■□□□□ 0.13
FREM3P0C091 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.84■□□□□ 0.13
FREM3P0C091 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.84■□□□□ 0.13
FREM3P0C091 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.84■□□□□ 0.13
FREM3P0C091 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.84■□□□□ 0.13
FREM3P0C091 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.84■□□□□ 0.13
FREM3P0C091 AC019129.2-201ENST00000609837 1235 ntBASIC15.84■□□□□ 0.13
FREM3P0C091 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
FREM3P0C091 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.84■□□□□ 0.13
FREM3P0C091 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FREM3P0C091 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FREM3P0C091 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FREM3P0C091 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
FREM3P0C091 AC108860.2-201ENST00000562760 2183 ntBASIC15.83■□□□□ 0.13
FREM3P0C091 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FREM3P0C091 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
FREM3P0C091 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms