Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.15■□□□□ 0.02
CSF1P09603 KRT8P7-201ENST00000533003 1432 ntBASIC15.15■□□□□ 0.02
CSF1P09603 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.15■□□□□ 0.02
CSF1P09603 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
CSF1P09603 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 AC011270.2-201ENST00000624293 2550 ntBASIC15.15■□□□□ 0.02
CSF1P09603 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.15■□□□□ 0.02
CSF1P09603 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSF1P09603 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CSF1P09603 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.15■□□□□ 0.02
CSF1P09603 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.15■□□□□ 0.02
CSF1P09603 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CSF1P09603 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.14■□□□□ 0.01
CSF1P09603 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.14■□□□□ 0.01
CSF1P09603 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.14■□□□□ 0.01
CSF1P09603 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 AC006011.2-201ENST00000621313 1158 ntBASIC15.14■□□□□ 0.01
CSF1P09603 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.14■□□□□ 0.01
CSF1P09603 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSF1P09603 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.14■□□□□ 0.01
CSF1P09603 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.14■□□□□ 0.01
CSF1P09603 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CSF1P09603 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 AC132938.6-201ENST00000623828 1655 ntBASIC15.13■□□□□ 0.01
CSF1P09603 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 AL391005.1-201ENST00000623953 2435 ntBASIC15.13■□□□□ 0.01
CSF1P09603 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CSF1P09603 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CSF1P09603 MESTP1-201ENST00000404287 994 ntBASIC15.13■□□□□ 0.01
CSF1P09603 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.13■□□□□ 0.01
CSF1P09603 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.13■□□□□ 0.01
CSF1P09603 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.13■□□□□ 0.01
CSF1P09603 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.13■□□□□ 0.01
CSF1P09603 AC091076.1-201ENST00000610741 619 ntBASIC15.13■□□□□ 0.01
CSF1P09603 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 AC130371.2-201ENST00000619443 611 ntBASIC15.13■□□□□ 0.01
CSF1P09603 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.13■□□□□ 0.01
CSF1P09603 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CSF1P09603 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.13■□□□□ 0.01
CSF1P09603 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSF1P09603 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms