Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 LINC00602-201ENST00000629776 2065 ntBASIC17.4■□□□□ 0.38
CAPNS1P04632 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CAPNS1P04632 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CAPNS1P04632 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.4■□□□□ 0.38
CAPNS1P04632 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.4■□□□□ 0.38
CAPNS1P04632 AC096582.2-201ENST00000510860 516 ntBASIC17.4■□□□□ 0.38
CAPNS1P04632 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.4■□□□□ 0.38
CAPNS1P04632 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.4■□□□□ 0.38
CAPNS1P04632 AC021087.4-201ENST00000563761 564 ntBASIC17.4■□□□□ 0.38
CAPNS1P04632 AC092364.2-202ENST00000597012 1073 ntBASIC17.4■□□□□ 0.38
CAPNS1P04632 AC239800.4-201ENST00000603712 296 ntBASIC17.4■□□□□ 0.38
CAPNS1P04632 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.4■□□□□ 0.38
CAPNS1P04632 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPNS1P04632 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CAPNS1P04632 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CAPNS1P04632 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CAPNS1P04632 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CAPNS1P04632 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.39■□□□□ 0.38
CAPNS1P04632 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.39■□□□□ 0.38
CAPNS1P04632 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.39■□□□□ 0.37
CAPNS1P04632 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPNS1P04632 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CAPNS1P04632 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPNS1P04632 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CAPNS1P04632 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPNS1P04632 METTL21AP1-201ENST00000438852 635 ntBASIC17.39■□□□□ 0.37
CAPNS1P04632 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.39■□□□□ 0.37
CAPNS1P04632 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
CAPNS1P04632 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.39■□□□□ 0.37
CAPNS1P04632 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPNS1P04632 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CAPNS1P04632 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPNS1P04632 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPNS1P04632 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CAPNS1P04632 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPNS1P04632 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CAPNS1P04632 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CAPNS1P04632 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.38■□□□□ 0.37
CAPNS1P04632 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPNS1P04632 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.38■□□□□ 0.37
CAPNS1P04632 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.38■□□□□ 0.37
CAPNS1P04632 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
CAPNS1P04632 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.38■□□□□ 0.37
CAPNS1P04632 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CAPNS1P04632 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPNS1P04632 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CAPNS1P04632 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms