Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 ACTG1P4-201ENST00000425123 1122 ntBASIC19.6■□□□□ 0.73
HMGCRP04035 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
HMGCRP04035 BASP1P1-201ENST00000430708 665 ntBASIC19.6■□□□□ 0.73
HMGCRP04035 AC005237.2-201ENST00000434368 219 ntBASIC19.6■□□□□ 0.73
HMGCRP04035 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.6■□□□□ 0.73
HMGCRP04035 FAM86C2P-203ENST00000528684 1004 ntBASIC19.6■□□□□ 0.73
HMGCRP04035 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.6■□□□□ 0.73
HMGCRP04035 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.6■□□□□ 0.73
HMGCRP04035 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCRP04035 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCRP04035 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
HMGCRP04035 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCRP04035 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HMGCRP04035 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HMGCRP04035 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 AL590787.1-201ENST00000568856 1315 ntBASIC19.59■□□□□ 0.73
HMGCRP04035 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HMGCRP04035 AC055876.3-201ENST00000431496 288 ntBASIC19.59■□□□□ 0.73
HMGCRP04035 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HMGCRP04035 HLA-J-202ENST00000469281 1241 ntBASIC19.59■□□□□ 0.73
HMGCRP04035 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCRP04035 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.59■□□□□ 0.73
HMGCRP04035 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.59■□□□□ 0.73
HMGCRP04035 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCRP04035 AC090164.3-201ENST00000610780 2143 ntBASIC19.59■□□□□ 0.73
HMGCRP04035 AC138649.4-201ENST00000612222 287 ntBASIC19.59■□□□□ 0.73
HMGCRP04035 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCRP04035 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HMGCRP04035 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCRP04035 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HMGCRP04035 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.58■□□□□ 0.73
HMGCRP04035 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.58■□□□□ 0.73
HMGCRP04035 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.58■□□□□ 0.73
HMGCRP04035 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HMGCRP04035 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCRP04035 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCRP04035 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCRP04035 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.58■□□□□ 0.73
HMGCRP04035 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HMGCRP04035 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCRP04035 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCRP04035 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
HMGCRP04035 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 MYCLP1-201ENST00000372451 1075 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 AC236430.1-201ENST00000402231 743 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
HMGCRP04035 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCRP04035 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCRP04035 SPDYE11-202ENST00000450699 704 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 AC002558.1-201ENST00000488906 803 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 AC005225.4-201ENST00000557330 545 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 AC051619.7-201ENST00000568314 623 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 SPDYE9P-201ENST00000570642 692 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCRP04035 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCRP04035 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCRP04035 SPDYE10P-202ENST00000612005 668 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 SPDYE8P-202ENST00000612377 668 ntBASIC19.58■□□□□ 0.72
HMGCRP04035 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCRP04035 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
HMGCRP04035 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCRP04035 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCRP04035 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCRP04035 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms